Research Topics Biomedical Imaging

By Prof. Fazal Rehman Shamil

Research Area/ Research Interest: Biomedical Imaging

Research Paper Topics for Masters and Ph.D. Thesis and publication

  1. Biomedical Imaging and Instrumentation
  2. Current update about instrumentation and utilization of PET-CT scan in oncology and human diseases
  3. Cadmium Sulfide/Zinc Sulfide Core–Shell Nanocomposite-Based Microwave Notch Filter for Biomedical Imaging
  4. Biomedical techniques in cellular and molecular diagnostics: Journey so far and the way forward
  5. Hyperspectral imaging: Current and potential clinical applications
  6. Role of CT scan in medical and dental imaging
  7. Magnetic resonance imaging: Basic principles and advancement in clinical and diagnostics approaches in health care
  8. PA Imaging: A promising tool for targeted therapeutic implications in Cancer
  9. MOEMS-Enabled Miniaturized Biomedical Sensing and Imaging System
  10.  Instrumentation for Hydrogenative Parahydrogen-Based Hyperpolarization Techniques
  11.  Advances in Surface Enhanced Raman Spectroscopy for in Vivo Imaging in Oncology
  12. Mammography—sentinel of breast cancer management
  13. Near-infrared spectroscopy: An important noninvasive and sensitive tool for point-of-care biosensing application
  14. Towards patient specific reconstruction using perception-aware cnn and planning ct as prior
  15. Instrumentation and methodology for volumetric stimulated Raman scattering imaging
  16. Introduction to biomedical instrumentation
  17.  Near-infrared probes for luminescence lifetime imaging
  18. Integrated photoacoustic and ultrasonic endoscopy mini-probe for use in the instrument channel of a clinical video endoscope
  19. Improvement of LED-based photoacoustic imaging using sign coherence factor based on lag-delay-multiply-and-sum beamformer
  20.  Confocal laser speckle autocorrelation imaging of dynamic flow in microvasculature
  21. Characterization of time-of-flight double-photon Compton imaging system by simulation
  22. As-net: fast photoacoustic reconstruction with multi-feature fusion from sparse data
  23. Targeted multicolor in vivo imaging over 1,000 nm enabled by nonamethine cyanines
  24. Magnetic particle imaging
  25. Retinal blood flow imaging with combined full-field swept-source optical
  26. Machine learning applications of surgical imaging for the diagnosis and treatment of spine disorders: Current state of the art
  27.  Alginate beads as a highly versatile test-sample for optoacoustic imaging
  28. Application of Artificial Intelligence in PET Instrumentation
  29.  DaXi—high-resolution, large imaging volume and multi-view single-objective light-sheet microscopy
  30.  In vivo imaging of the human eye using a 2-photon-excited fluorescence scanning laser ophthalmoscope
  31. Intraoperative multimodal imaging
  32. Status of DEXA Instrumentation Using Direct and Indirect Detectors
  33.  Spectral imaging with deep learning
  34. CD44-targeted, indocyanine green-paclitaxel-loaded human serum albumin nanoparticles for potential image-guided drug delivery
  35. TOF-SIMS Imaging of Biological Tissue Sections and Structural Determination Using Tandem MS
  36. On the Limit of Detection in Infrared Spectroscopic Imaging
  37.  Near-infrared active superparamagnetic iron oxide nanoparticles for magnetomotive optical coherence tomography imaging and magnetic hyperthermia therapeutic …
  38. Engineering autobioluminescent eukaryotic cells as tools for environmental and biomedical surveillance
  39. Advances in Imaging
  40.  Lateral Resolution of a Commercial Optical Coherence Tomography Instrument
  41. A novel near-infrared fluorescent probe for rapid detection of peroxynitrite with large stokes shift and imaging in living cells
  42.  Light sheet based volume flow cytometry (VFC) for rapid volume reconstruction and parameter estimation on the go
  43. First clinical investigation of near-infrared window IIa/IIb fluorescence imaging for precise surgical resection of gliomas
  44.  High speed, long range, deep penetration swept source OCT for structural and angiographic imaging of the anterior eye
  45. Terahertz spectroscopy: Encoding the discovery, instrumentation, and applications toward pharmaceutical prospectives
  46. Label-Free Multiphoton Imaging of Microbes in Root, Mineral, and Soil Matrices with Time-Gated Coherent Raman and Fluorescence Lifetime Imaging
  47. Molecular fluorophores for in vivo bioimaging in the second near-infrared window
  48. Magnetic particle imaging for assessment of cerebral perfusion and ischemia
  49. Deep learning in macroscopic diffuse optical imaging
  50. Surface‐assisted laser desorption/ionization mass spectrometry imaging: A review
  51. A Modified Noise Model of Electrical Impedance Tomography System by Considering Colored Noises
  52.  Hybrid optical parametrically-oscillating emitter at 1930 nm for volumetric photoacoustic imaging of water content
  53. FPI Based Hyperspectral Imager for the Complex Surfaces—Calibration, Illumination and Applications
  54. High‐resolution pH imaging using ratiometric chemical exchange saturation transfer combined with biosensor imaging of redundant deviation in shifts featuring …
  55. Albumin-Consolidated AIEgens for Boosting Glioma and Cerebrovascular NIR-II Fluorescence Imaging
  56. Development of raspberry Pi single-board computer architecture based ultra-compact optical coherence tomography
  57. Simultaneous multi-analyte sensing using a 2D quad-beam diffraction smartphone imaging spectrometer
  58.  BIOMEDICAL APPLICATIONS OF WO3, ZNO AND GRAPHENE NANOPARTICLES
  59. Ultrasonic Bubble Imaging in Molten Salt using a Multi-Mode Waveguide and Time Reversal
  60. Development of a miniaturized and modular probe for fNIRS instrument
  61.  From Sensing to Chemical Imaging
  62.  Bioinspired photo-crosslinkable self-assembling peptides with pH-switchable “on–off” luminescence
  63.  Optics-Free Imaging with DNA Microscopy: An Overview
  64. A Miniaturized Quartz Crystal Microbalance (QCM) Measurement Instrument Based on a Phase-Locked Loop Circuit
  65. Zwitterion-Coated Ultrasmall MnO Nanoparticles Enable Highly Sensitive T1-Weighted Contrast-Enhanced Brain Imaging
  66. Integrated photoacoustic and ultrasonic endoscopy as a new tool for the early diagnosis of malignant biliary stricture
  67. Micro-CT and volumetric imaging in developmental toxicology
  68. Clinical translation of hyperpolarized 13C pyruvate and urea MRI for simultaneous metabolic and perfusion imaging
  69. Single-shot TIE using polarization multiplexing (STIEP) for quantitative phase imaging
  70. Quantification of the effectivity of laser therapy shortly following brain injury via dual-wavelength laser imaging
  71. Plasma IL‐12/IFN‐γ axis predicts cognitive trajectories in cognitively unimpaired older adults
  72. Applicability of large-area single-photon counting detectors Timepix for high-resolution and high-contrast X-ray imaging of biological samples
  73. Imaging spectrum reconstruction of a spatial heterodyne imaging spectrometer
  74. Preparation and photoluminescent analysis of Sm3+ complexes based on unsymmetrical conjugated chromophoric ligand
  75. Diffractive all-optical computing for quantitative phase imaging
  76. Comparison of prospective and retrospective motion correction in 3D‐encoded neuroanatomical MRI
  77. Tetraphenylethene functionalized quinoxaline derivative exhibiting aggregation-induced emission and multi-stimuli responsive fluorescent switching
  78. Exogenous Contrast Agents in Photoacoustic Imaging: An In Vivo Review for Tumor Imaging
  79.  Principles of adaptive optics
  80.  Generation of high-uniformity and high-resolution Bessel beam arrays through all-dielectric metasurfaces
  81. Magnetic particle imaging: tracer development and the biomedical applications of a radiation-free, sensitive, and quantitative imaging modality
  82. Biophotonics web application for computer simulations in diffuse optics: fostering multidisciplinary education and research
  83. … of lateral resolution and sharpness in beam‐based methods with a range from nanometres to micrometres and its implementation for imaging laboratory X‐ray …
  84. Intracranial Hemorrhage Detection by Open MIT Sensor Array
  85. Three-dimensional semiquantitative analysis of gastric emptying SPECT
  86. Fluorescence sensing and imaging with carbon-based quantum dots for early diagnosis of cancer: A review
  87. A method of tumor in vivo imaging with a new peptide-based fluorescent probe
  88. Photocatalytic removal of benzene over Ti 3 C 2 T x MXene and TiO 2–MXene composite materials under solar and NIR irradiation
  89. Ex vivo hypercellular parathyroid gland differentiation using dynamic optical contrast imaging (DOCI)
  90. Pointer-type instrument positioning method of intelligent inspection system for substation
  91. Motion in nuclear cardiology imaging: types, artifacts, detection and correction techniques
  92. A DSP-Based EIT System with Adaptive Boundary Voltage Acquisition
  93. Nuclear Cardiac Imaging in the Interventional Suite
  94. The Effects of Monophasic Anodal Transcranial Pulsed Current Stimulation on Corticospinal Excitability and Motor Performance in Healthy Young Adults: A …
  95. Studying axonal transport in the brain by manganese-enhanced magnetic resonance imaging (MEMRI)
  96.  Video-rate dual-modal photoacoustic and fluorescence imaging through a multimode fibre towards forward-viewing endomicroscopy
  97. Near-Infrared Photoacoustic Probe for Reversible Imaging of the ClO–/GSH Redox Cycle In Vivo
  98. Physical and Imaging Performance of SIAT aPET under Different Energy Windows and Timing Windows
  99. Accurate Single-Molecule Kinetic Isotope Effects
  100. Generative adversarial networks in medical image augmentation: a review
  101. Tryptophan analysis using multiphoton microscopy and fluorescence lifetime imaging
  102. Assessing generalisability of deep learning-based polyp detection and segmentation methods through a computer vision challenge
  103. Analysis of Melanoma Cancer Detection Techniques
  104. Reconstruction of optical coefficients in turbid media using time-resolved reflectance and calibration-free instrument response functions
  105. Phosphorescent NIR emitters for biomedicine: applications, advances and challenges
  106. Preparation and photoluminescent characteristics of green Tb (III) complexes with β-diketones and N donor auxiliary ligands
  107.  Potential-Driven Electrochemical Clearing of Ex Vivo Alkaline Corneal Injuries
  108. Identification of twin and nanoscale Te precipitations in CdZnTe crystals grown by vertical gradient method with HRTEM
  109.  Label-free metabolic and structural profiling of dynamic biological samples using multimodal optical microscopy with sensorless adaptive optics
  110. Polarization imaging based on time-integration by a continuous rotating polarizer
  111. Volumetric characterization of microvasculature in ex vivo human brain samples by serial sectioning optical coherence tomography
  112. Accurate segmentation of breast tumors using AE U-net with HDC model in ultrasound images
  113. Comparison of Lanthanide Macrocyclic Complexes as 23Na NMR Sensors
  114. A Second Near-Infrared Ru (II) Polypyridyl Complex for Synergistic Chemo-Photothermal Therapy
  115. Small-molecule fluorescent probes: big future for specific bacterial labeling and infection detection
  116. Multidisciplinary teaching and learning biophotonics: assessing the effectiveness of fully online outreach events
  117. Electrochemiluminescent emission potential tunable Cu–Zn–In–S/ZnS nanocrystals for multiplex microRNAs potential-resolved detection
  118. Structure, up-conversion luminescence and optical temperature sensitive properties of glass ceramics containing Ca5 (PO4) 3F with double luminescence centers
  119. Development, Implementation and Validation of Thermal Magnetic Resonance Technology: A New Instrument to Define the Role of Temperature in Biological Systems …
  120. SPIO nanoparticles and magnetic erythrocytes as contrast agents for biomedical and diagnostic applications
  121. Patient-Specific Instrumentation and 3-D Osteotomy
  122. Super-multiplexed vibrational probes: Being colorful makes a difference
  123. Three-dimensional reconstruction of magnetic resonance images of carp brain for brain control technology
  124. Wearable Slotted Patch Antenna with the Defected Ground Structure for Biomedical Applications
  125. Movement correction method for laser speckle contrast imaging of cerebral blood flow in cranial windows in rodents
  126. Protein and peptide engineering for chemical exchange saturation transfer imaging in the age of synthetic biology
  127. Quantifying Tumor and Vasculature Deformations during Laryngoscopy
  128. New Proposals for Application of Terahertz Imaging Technique in Chinese Medicine
  129. Virtual Reality in Neurosurgery: Beyond Neurosurgical Planning
  130.  High-resolution photoacoustic microscopy with deep penetration through learning
  131.  Subcutaneous Low-Density Foreign Bodies Detection via Grating-Based Multimodal X-ray Imaging
  132. An effective Fe (ii) doping strategy for stable and highly photoluminescent CsPbBrI 2 nanocrystals
  133. Automatic Diagnosis of Different Grades of Diabetic Retinopathy and Diabetic Macular Edema Using 2D-FBSE-FAWT
  134. Optical polarization response of collagen: role in clinical cancer diagnostics—part I
  135. External Dynamic InTerference Estimation and Removal (EDITER) for low field MRI
  136. Unsupervised arterial spin labeling image superresolution via multiscale generative adversarial network
  137. Infrared computer vision in non-destructive imaging: Sharp delineation of subsurface defect boundaries in enhanced truncated correlation photothermal coherence …
  138. In Vivo Small Animal Imaging: A Comparison to Gross and Histopathologic Observations in Animal Models
  139.  3D Echo Planar Time-resolved Imaging (3D-EPTI) for ultrafast multi-parametric quantitative MRI
  140. Computational fluid dynamics modeling and analysis of silica nanoparticle synthesis in a flame spray pyrolysis reactor
  141. What is the role of magnification correction in the measurement of macular microvascular dimensions in emmetropic eyes?
  142.  Spatial transcriptomics using combinatorial fluorescence spectral and lifetime encoding, imaging and analysis
  143.  Comprehensive imaging of microcirculatory changes in the foot during endovascular intervention–A technical feasibility study
  144.  Opportunities for biomineralization research using multiscale computed X-ray tomography as exemplified by bone imaging
  145. Single-shot multispectral quantitative phase imaging using deep neural network
  146. Physics-based Simulation and Machine Learning for the Practical Implementation of EIT-based Tactile Sensors
  147. Ms RED: A novel multi-scale residual encoding and decoding network for skin lesion segmentation
  148. Deep neural networks for magnetic resonance elastography acceleration in thermal ablation monitoring
  149. Deep‐dLAMP: Deep Learning‐Enabled Polydisperse Emulsion‐Based Digital Loop‐Mediated Isothermal Amplification
  150. 3D reconstruction based on photoelastic fringes
  151. Optical properties of human brain and tumour tissue: An ex vivo study spanning the visible range to beyond the second near‐infrared window
  152. Optical measurement of microvascular oxygenation and blood flow responses in awake mouse cortex during functional activation
  153. Use of U-Net Convolutional Neural Networks for Automated Segmentation of Fecal Material for Objective Evaluation of Bowel Preparation Quality in Colonoscopy
  154.  Selection field generation using permanent magnets and electromagnets for a magnetic particle imaging scanner
  155. On the investigation of the energy transfer in Ca9Lu (PO4) 7: Eu2+, Mn2+, Nd3+
  156. Continuous Artery Monitoring Using a Flexible and Wearable Single-Element Ultrasonic Sensor
  157. Spatial mapping of protein composition and tissue organization: a primer for multiplexed antibody-based imaging
  158.  Applications of AI and HPC in the Health Domain
  159.  Single-shot mid-infrared incoherent holography using Lucy-Richardson-Rosen algorithm
  160. … conductive nanocomposites elastomers with intrinsical efficient antibacterial and anticancer activity for enhanced biomedical application potential”[Biomaterials 201 …
  161.  Diffuse optical reconstructions of functional near infrared spectroscopy data using maximum entropy on the mean
  162.  Cutting-Edge Biomedical Research on the Amarillo Campus of TTUHSC: History and Outlook
  163. Complementary effects of torrefaction and pelletization for the production of fuel pellets from agricultural residues: A comparative study
  164. Unsupervised super resolution network for hyperspectral histologic imaging
  165. Biodegradable Fiducial Markers for Bimodal Near-Infrared Fluorescence-and X-ray-Based Imaging
  166. Upconverted/downshifted NaLnF4 and metal-organic framework heterostructures boosting NIR-II imaging-guided photodynamic immunotherapy toward tumors
  167. Quantitative Isothermal Amplification on Paper Membranes using Amplification Nucleation Site Analysis
  168. Mineralogy of the RBT 04262 Martian meteorite as determined by micro‐Raman and micro‐X‐ray fluorescence spectroscopies
  169. One-dimensional convolutional neural networks design for fluorescence spectroscopy with prior knowledge: explainability techniques applied to olive oil fluorescence …
  170. Synthesis and Characterization of BaSO4–CaCO3–Alginate Nanocomposite Materials as Contrast Agents for Fine Vascular Imaging
  171. CT/bioluminescence dual-modal imaging tracking of stem cells labeled with [email protected] [email protected] PEG nanotracers and RfLuc in nintedanib-assisted pulmonary fibrosis therapy
  172. Road to automating robotic suturing skills assessment: Battling mislabeling of the ground truth
  173. Semi-automatic segmentation of skin lesions based on superpixels and hybrid texture information
  174.  Targeting a proteolytic neoepitope on CUB domain containing protein 1 (CDCP1) for RAS-driven cancers
  175. CT-like MRI: a qualitative assessment of ZTE sequences for knee osseous abnormalities
  176. NIR-OLED structures based on lanthanide coordination compounds: synthesis and luminescent properties
  177. Potential of Raman Spectroscopy for Blood-Based Biopsy
  178.  CariesNet: a deep learning approach for segmentation of multi-stage caries lesion from oral panoramic X-ray image
  179. Noninvasive instrument-based tests for detecting and measuring vitreous inflammation in uveitis: a systematic review
  180. Fluorescence lifetime needle optical biopsy discriminates hepatocellular carcinoma
  181. Overview of the application of inorganic nanomaterials in breast cancer diagnosis
  182. SOUP-GAN: Super-resolution MRI using generative adversarial networks
  183.  Development A Low-Cost Electrical Impedance Tomography System For Non-Invasively Detecting Abnormal In Breast Tissue-Phantom Study
  184. RMS-UNet: Residual multi-scale UNet for liver and lesion segmentation
  185. 3-D High Frequency Ultrasound Imaging by Piezo-Driving a Single-Element Transducer
  186. Bone density optimized pedicle screw instrumentation improves screw pull-out force in lumbar vertebrae
  187. Bioimaging applications of chitosan-based systems
  188. Highly-multiplexed volumetric mapping with Raman dye imaging and tissue clearing
  189. Literature review: Efficient deep neural networks techniques for medical image analysis
  190. Fabricating Dual-Functional Plasmonic–Magnetic [email protected] Nanohybrids for Photothermal Therapy and Magnetic Resonance Imaging
  191. Amplification of Activated Near-Infrared Afterglow Luminescence by Introducing Twisted Molecular Geometry for Understanding Neutrophil-Involved Diseases
  192.  Ultrasmall gold nanorod-polydopamine hybrids for enhanced photoacoustic imaging and photothermal therapy in second near-infrared window
  193. Biomedical applications of mobile devices in miniaturized analysis
  194. Investigation of the Relationship Between Localization Accuracy and Sensor Array
  195. Sub‐micro scale cell segmentation using deep learning†
  196. PEGylated Gold Nanoparticle Toxicity in Cardiomyocytes: Assessment of Size, Concentration, and Time Dependency
  197.  Multiple-mouse magnetic resonance imaging with cryogenic radiofrequency probes for evaluation of brain development
  198. Artificial Intelligence in Lymphoma PET Imaging:: A Scoping Review (Current Trends and Future Directions)
  199. Preparation of Radiolabeled Antibodies for Nuclear Medicine Applications in Immuno-Oncology
  200. Generalizing deep learning brain segmentation for skull removal and intracranial measurements
  201. Compact sub-nanosecond time-gated camera based on a new 64×64 Current-Assisted Photonic Sampler (CAPS) sensor with improved quantum efficiency
  202. Denoise SRS images
  203. Cervical alignment and clinical outcome of open-door laminoplasty vs. laminectomy and instrumentation in kyphotic multilevel cervical degenerative myelopathy
  204. High-fidelity and rapid cellular-level Mueller matrix imaging for tissue identification with unstained sections: erratum
  205. Promoted NIR‐II Fluorescence by Heteroatom‐Inserted Rigid‐Planar Cores for Monitoring Cell Therapy of Acute Lung Injury
  206. Super-resolution microscopy for structural cell biology
  207. An artificial intelligence framework and its bias for brain tumor segmentation: A narrative review
  208.  Diagnosis of Choroidal Disease With Deep Learning-Based Image Enhancement and Volumetric Quantification of Optical Coherence Tomography
  209. Cognitive profile of people with mild behavioral impairment in Brain Health Registry participants
  210. Rapid histological imaging of bone without microtome sectioning using nonlinear microscopy
  211. Luminescence properties of color-tunable phosphor material CaF2: Eu
  212. NIR-II Functional Materials for Photoacoustic Theranostics
  213. Application of digital PCR for public health-related water quality monitoring
  214.  ParaHydrogen Induced Polarization of 13C carbonyl resonance in acetate and pyruvate
  215.  Optimizing the mechanical and surface topography of hydroxyapatite/Gd2O3/graphene oxide nanocomposites for medical applications
  216. Multiplex optical bioassays for food safety analysis: Toward on‐site detection
  217. Recent development of metal-organic framework nanocomposites for biomedical applications
  218. Workflow and performance of intraoperative CT, cone-beam CT, and robotic cone-beam CT for spinal navigation in 503 consecutive patients
  219.  GDV Based Imaging for Health Status Monitoring: Some Innovative Experiments and Developments
  220. Simultaneous multiple-level magnification selective plane illumination microscopy (sMx-SPIM) imaging system
  221. Human brain functional MRS reveals interplay of metabolites implicated in neurotransmission and neuroenergetics
  222. Multi-scattering software part II: experimental validation for the light intensity distribution
  223.  A silent two-photon imaging system for studying in vivo auditory neuronal functions
  224. 3-photon fluorescence and third-harmonic generation imaging of myelin sheaths in mouse digital skin in vivo: A comparative study
  225. Real-time PDT dose dosimetry for pleural photodynamic therapy
  226. Near infrared fluorescence imaging of the urethra: a systematic review of the literature
  227.  In-vivo functional and structural retinal imaging using multiwavelength photoacoustic remote sensing microscopy
  228. Cough/X-ray/CT (CXC) website for testing COVID-19 and auto-informing results
  229. Adaptation of a bacterial bioluminescent assay to monitor bioeffects of gold nanoparticles
  230. Design of a real-time fiber-optic infrared imaging system with wide-angle and large depth of field
  231. Hydrogen Peroxide and Hypochlorite Responsive Fluorescent Nanoprobes for Sensitive Cancer Cell Imaging
  232. Beyond Visual Image: Automated Diagnosis of Pigmented Skin Lesions Combining Clinical Image Features with Patient Data
  233. The Multifarious Applications of Copper Nanoclusters in Biosensing and Bioimaging and Their Translational Role in Early Disease Detection
  234. Face Processing in School Children with Dyslexia: Neuropsychological and Eye-tracking Findings
  235.  Animal models and high field imaging and spectroscopy
  236.  Box-Trainer Assessment System with Real-Time Multi-Class Detection and Tracking of Laparoscopic Instruments, using CNN
  237. General Method to Increase Carboxylic Acid Content on Nanodiamonds
  238. Improving colorectal cancer detection by extending the near-infrared wavelength range and tissue probed depth of diffuse reflectance spectroscopy: a support vector …
  239. Quantitative imaging of tyrosine kinase inhibitor distribution in live cells and tissues
  240.  The Importance of Routine Quality Control For Reproducible Pulmonary Measurements By in Vivo Micro-CT
  241.  Evaluation of rotary file system (Kedo-S-Square) in root canal preparation of primary anterior teeth using cone beam computed tomography (CBCT)-in vitro …
  242.  Gold nanoparticles conjugated with DNA aptamer for photoacoustic detection of human matrix metalloproteinase-9
  243.  Magnetic resonance imaging study of diamagnetic and paramagnetic agents for optical clearing of tumor-specific fluorescent signal in vivo
  244. Performance Comparison of Deep Learning Architectures for Artifact Removal in Gastrointestinal Endoscopic Imaging
  245. Artificial Intelligence-Based Approaches to Reflectance Confocal Microscopy Image Analysis in Dermatology
  246. Early outcomes of growth friendly instrumentation in children with Williams syndrome
  247. Contactless Remote Assessment of Heart Rate and Respiration Rate Using Video Magnification
Prof.Fazal Rehman Shamil (Available for Professional Discussions)
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